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AgroBRC - RARe Réseaux & expertises Publications scientifiques Publications 2018

Publications 2018

  1. Abul-Sood M.I., Gadallah N.S., Hossni M.T. & Delvare G. 2018. The subfamily Cratocentrinae (Hymenoptera: Chalcididae): reappraisal of their morphological characters and review of the West Palaearctic species, with the description of two new species. Zootaxa 4377(4): 490-516 (doi:10.11646/zootaxa.4377.4.2)
  2. Alaux, Michael, Jane Rogers, Thomas Letellier, Raphaël Flores, Françoise Alfama, Cyril Pommier, Nacer Mohellibi, et al. 2018. « Linking the International Wheat Genome Sequencing Consortium Bread Wheat Reference Genome Sequence to Wheat Genetic and Phenomic Data ». Genome Biology 19 (1): 111. https://doi.org/10.1186/s13059-018-1491-4.
  3. Amoikon TLS, Grondin C, Djéni TN, Jacques N, Casaregola S.Starmerella reginensis f.a., sp. nov. and Starmerella kourouensis f.a., sp. nov., isolated from flowers in French Guiana. Int J Syst Evol Microbiol. (2018). 68(7):2299-2305. DOI: 10.1099/ijsem.0.002829.
  4. André C, Hytönen MK, Lohi H, Welle MM, Roosje P, Mellersh C, Casal ML, Leeb T.. 2018 MKLN1 splicing defect in dogs with lethal acrodermatitis. PLoS Genet. 2018 Mar 22"
  5. Appels, R., K. Eversole, C. Feuillet, B. Keller, J. Rogers, N. Stein, C.J. Pozniak, et al. 2018. « Shifting the limits in wheat research and breeding using a fully annotated reference genome ». Science 361 (6403). https://doi.org/10.1126/science.aar7191.
  6. Aulus-Giacosa, J-C. Aymes, P. Gaudin, M. Vignon. (2018). A hierarchical variance decomposition of fish scales growth and age to investigate the respective contributions of readers and scales. Marine and Freshwater Research. Special Issue. Under Review.
  7. Barre, P., T. Ruttink, H. Muylle, P. Lootens, J.-P. Sampoux, A. Rohde, D. Combes, et I. Roldán-Ruiz. 2018. « Natural Diversity in Vegetative and Reproductive Investments of Perennial Ryegrass Is Shaped by the Climate at the Place of Origin ». Grass and Forage Science 73 (1): 193‑205. https://doi.org/10.1111/gfs.12304.
  8. Battle Karimi, Sébastien Terrat, Samuel Dequiedt, Nicolas P. A. Saby, Walid Horrigue, Mélanie Lelièvre, Virginie Nowak, Claudy Jolivet, Dominique Arrouays, Patrick Wincker, Corinne Cruaud, Antonio Bispo, Pierre-Alain Maron, Nicolas Chemidlin Prévost-Bouré, Lionel Ranjard. Biogeography of soil bacteria and archaea across France. Sci. Adv. 2018; 4 : eaat1808
  9. Bernard, A., T. Barreneche, F. Lheureux, et E. Dirlewanger. 2018. « Analysis of genetic diversity and structure in a worldwide walnut (Juglans regia L.) germplasm using SSR markers ». PLoS ONE 13 (11). https://doi.org/10.1371/journal.pone.0208021.
  10. Bonnafous, Fanny, Ghislain Fievet, Nicolas Blanchet, Marie-Claude Boniface, Sebastien Carrere, Jerome Gouzy, Ludovic Legrand, et al. 2018. « Comparison of GWAS models to identify non-additive genetic control of flowering time in sunflower hybrids ». THEORETICAL AND APPLIED GENETICS 131 (2): 319‑32. https://doi.org/10.1007/s00122-017-3003-4.
  11. Bourion, Virginie, Karine Heulin-Gotty, Veronique Aubert, Pierre Tisseyre, Marianne Chabert-Martinello, Marjorie Pervent, Catherine Delaitre, et al. 2018. « Co-inoculation of a Pea Core-Collection with Diverse Rhizobial Strains Shows Competitiveness for Nodulation and Efficiency of Nitrogen Fixation Are Distinct traits in the Interaction ». FRONTIERS IN PLANT SCIENCE 8 (janvier). https://doi.org/10.3389/fpls.2017.02249.
  12. Burstin, Judith, Catherine Rameau, Virginie Bourion, et Nadim Tayeh. 2018. « The PeaMUST project: defining ideotypes for the pea crop development ». OCL-OILSEEDS AND FATS CROPS AND LIPIDS 25 (6). https://doi.org/10.1051/ocl/2018056.
  13. Castro Nunes, Renata de, Simon Orozco-Arias, Dominique Crouzillat, Lukas A. Mueller, Suzy R. Strickler, Patrick Descombes, Coralie Fournier, et al. 2018. « Structure and Distribution of Centromeric Retrotransposons at Diploid and Allotetraploid Coffea Centromeric and Pericentromeric Regions ». Frontiers in Plant Science 9 (février): 175. https://doi.org/10.3389/fpls.2018.00175.
  14. Cécile F.E. Bacles, Colin Bouchard, Frédéric Lange, Aurélie Manicki, Cédric Tentelier, et al.. Estimating the effective number of breeders from single parr samples for conservation monitoring of wild populations of Atlantic salmon Salmo salar. Journal of Fish Biology, Wiley, 2018, 92 (3), pp.online first. ⟨10.1111/jfb.13537⟩. ⟨hal-01716615⟩
  15. Chang, K.-W.; Tseng, Y.-T.; Chen, Y.-C.; Yu, C.-Y.; Liao, H.-F.; Chen, Y.-C.; Tu, Y.-F. E.; Wu, S.-C.; Liu, I. H.; Pinskaya, M.; Morillon, A.; Pain, B.; Lin, S.-P. 2018 Stage-Dependent PiRNAs in Chicken Implicated Roles in Modulating Male Germ Cell Development. BMC Genomics 2018, 19 (1), 425.
  16. Charron, Carine, Jacqueline Hubert, Janice Minatchy, Véronique Wilson, Fabiola Chrysot, Scholastie Gerville, Renaud Ioos, Céline Jeandel, et Michel Grisoni. 2018. « Characterization of Colletotrichum Orchidophilum, the Agent of Black Spot Disease of Vanilla ». Journal of Phytopathology 166 (7‑8): 525‑31. https://doi.org/10.1111/jph.12714.
  17. Chen Y-C, Chang W-C, Lin S-P, Minami M, Jean C, Hayashi H, … Pain B.. 2018 Three-dimensional culture of chicken primordial germ cells (cPGCs) in defined media containing the functional polymer FP003. PLoS ONE 13(9):
  18. Chesneau, Thomas, Geraldine Maignien, Claudine Boyer, Jean-Jacques Cheron, Michel Roux-Cuvelier, Luc Vanhuffel, Stephane Poussier, et Philippe Prior. 2018. « Sequevar Diversity and Virulence of Ralstonia solanacearum Phylotype I on Mayotte Island (Indian Ocean) ». FRONTIERS IN PLANT SCIENCE 8 (janvier). https://doi.org/10.3389/fpls.2017.02209.
  19. Colin Bouchard, Agnes Bardonnet, Mathieu Buoro, Cédric Tentelier. Effects of spatial aggregation of nests on population recruitment: the case of a small population of Atlantic salmon. Ecosphere, Ecological Society of America, 2018, 9 (4), 18 p. ⟨10.1002/ecs2.2178⟩. ⟨hal-01773150⟩
  20. Combes, Marie-Christine, Thierry Joet, et Philippe Lashermes. 2018. « Development of a rapid and efficient DNA-based method to detect and quantify adulterations in coffee (Arabica versus Robusta) ». FOOD CONTROL 88 (juin): 198‑206. https://doi.org/10.1016/j.foodcont.2018.01.014.
  21. Cruaud A., Gonzalez A.-A., Godefroid M., Nidelet S., Streito J.-C., Thuillier J.-M., Rossi J.-P., Santoni S. & Rasplus J.-Y. 2018. Using insects to detect, monitor and predict the distribution of Xylella fastidiosa: a case study in Corsica. Scientific Reports 8(1): 15628 (doi:10.1038/s41598-018-33957-z)
  22. Cruaud A., Groussier G., Genson G., Sauné L., Polaszek A. & Rasplus J.-Y. 2018. Pushing the limits of whole genome amplification: successful sequencing of RADseq library from a single microhymenopteran (Chalcidoidea, Trichogramma). PeerJ 6: e5640 (doi:10.7717/peerj.5640)
  23. Dall’Agata, Michela, G. Pagliarani, S. Padmarasu, M. Troggio, L. Bianco, E. Dapena, M. Miñarro, et al. 2018. « Identification of Candidate Genes at the Dp-Fl Locus Conferring Resistance against the Rosy Apple Aphid Dysaphis Plantaginea ». Tree Genetics & Genomes 14 (1): 12. https://doi.org/10.1007/s11295-018-1227-3.
  24. Darracq, Aude, Clementine Vitte, Stephane Nicolas, Jorge Duarte, Jean-Philippe Pichon, Tristan Mary-Huard, Celine Chevalier, et al. 2018. « Sequence analysis of European maize inbred line F2 provides new insights into molecular and chromosomal characteristics of presence/absence variants ». BMC GENOMICS 19 (février). https://doi.org/10.1186/s12864-018-4490-7.
  25. De Beris, Claudia, Debora Casarini, Samuel Buff, Loris Commin, et Anne Josson-Schramme. 2018 « Freezing donkey semen with six different freezing extender ». ANIMAL REPRODUCTION SCIENCE 194 (juillet 2018): E21
  26. Deleuze, Stefan, Cecile Douet, Isabelle Couty, Carla Moros-Nicolas, Philippe Barriere, Thierry Blard, Fabrice Reigner, Michele Magistrini, et Ghylene Goudet. 2018. « Ovum Pick Up and In Vitro Maturation of Jennies Oocytes Toward the Setting Up of Efficient In Vitro Fertilization and In Vitro Embryos Culture Procedures in Donkey (Equus asinus) ». JOURNAL OF EQUINE VETERINARY SCIENCE 65 (juin 2018): 111‑17
  27. Delvare G. & Copeland R.S. 2018. Four-horned wasps, description of some remarkable Dirhinus (Hymenoptera, Chalcididae) from Kenya, with a discussion of their taxonomic placement. Zootaxa 4374(3): 301-349 (doi:10.11646/zootaxa.4374.3.1)
  28. Desgroux, Aurore, Valentin N. Baudais, Veronique Aubert, Gwenola Le Roy, Henri de Larambergue, Henri Miteul, Gregoire Aubert, et al. 2018. « Comparative Genome-Wide-Association Mapping Identifies Common Loci Controlling Root System Architecture and Resistance to Aphanomyces euteiches in Pea ». FRONTIERS IN PLANT SCIENCE 8 (janvier). https://doi.org/10.3389/fpls.2017.02195.
  29. Dussert, S., J. Serret, A. Bastos-Siqueira, F. Morcillo, E. Déchamp, V. Rofidal, P. Lashermes, H. Etienne, et T. Joët. 2018. « Integrative analysis of the late maturation programme and desiccation tolerance mechanisms in intermediate coffee seeds ». Journal of Experimental Botany 69 (7): 1583‑97. https://doi.org/10.1093/jxb/erx492.
  30. Elias L.G., Kjellberg F., Farache F., Almeida E.A.B., Rasplus J.-Y., Cruaud A., Peng Y.-Q., Yang D.-R. & Pereira R.A.S. 2018. Ovipositor morphology correlates with life history evolution in agaonid fig wasps. Acta Oecologica 90: 109-116 (doi:10.1016/j.actao.2017.10.007)
  31. F Cousin, R Le Guellec, V Chuat, M Dalmasso, J–M Laplace. Multiplex PCR for rapid identification of major lactic acid bacteria genera in cider and other fermented foods. International Journal of Food Microbiology, Elsevier, 2019, 291, pp.17–24. ⟨10.1016/j.ijfoodmicro. (2018).11.004⟩. ⟨hal–01977627⟩
  32. F Valence, Y Le Loir. Bienvenue à la banque des bactéries alimentaires. The Conversation, The Conversation France, (2018), ⟨hal–01793725⟩
  33. Fabrèges, D., Daniel, N., Duranthon, V., Peyriéras, N. 2018 Control of the proportion of inner cells by asymmetric divisions and the ensuing resilience of cloned rabbit embryos. Development 145.
  34. Falahatpisheh A., Fallahzadeh M., Dousti A. & Delvare G. 2018. Review of Iranian Chalcididae (Hymenoptera, Chalcidoidea) with nomenclatural notes. Zootaxa 4394(2): 251-269 (doi:10.11646/zootaxa.4394.2.8)
  35. Farache F., Cruaud A., Rasplus J.-Y., Cerezini M.T., Rattis L., Kjellberg F. & Pereira R.A.S. 2018. Insights into the structure of plant-insect communities: Specialism and generalism in a regional set of non-pollinating fig wasp communities. Acta Oecologica 90: 49-59 (doi:10.1016/j.actao.2018.02.006)
  36. Farache F.H.A., Pereira C.B., Koschnitzke C., Barros L.O., Souza E.M.d.C., Felício D.T., Gatti F., Cardona W., Rasplus J.-Y. & Pereira R.A.S. 2018. The unknown followers: Discovery of a new species of Sycobia Walker (Hymenoptera: Epichrysomallinae) associated with Ficus benjamina L. (Moraceae) in the Neotropical region. Journal of Hymenoptera Research 67: 85-102 (doi:10.3897/jhr.67.29733)
  37. Fatira, E., Havelka, M., Labbé, C., Depincé, A., Iegorova, V., Pšenička, M., Saito, T.,. 2018 Application of interspecific Somatic Cell Nuclear Transfer (iSCNT) in sturgeons and an unexpectedly produced gynogenetic sterlet with homozygous quadruple haploid. Scientific Reports 8, 5997.
  38. Fuet, A., Montillet, G., Jean, C., Aubel, P., Kress, C., Rival-Gervier, S., Pain, B. 2018 NANOG Is Required for the Long-Term Establishment of Avian Somatic Reprogrammed Cells. Stem Cell Reports, 11, 1272–1286,
  39. G.Vergnaud, Y Hauck, D Christiany, B Daoud, C Pourcel, I Jacques, A. Cloeckaert, M Zygmunt. Genotypic expansion within the population structure of classical Brucella species revealed by MLVA16 typing of 1404 Brucella isolates from different animal and geographic origins, 1974-2006. Frontiers in Microbiology, 9, 1-11.(2018). DOI : 10.3389/fmicb.2018.01545
  40. Gallage, Nethaji J, Kirsten Jørgensen, Christian Janfelt, Agnieszka J Z Nielsen, Thomas Naake, Eryk Duński, Lene Dalsten, Michel Grisoni, et Birger Lindberg Møller. 2018. « The Intracellular Localization of the Vanillin Biosynthetic Machinery in Pods of Vanilla Planifolia ». Plant and Cell Physiology 59 (2): 304‑18. https://doi.org/10.1093/pcp/pcx185.
  41. Gibon F.-M. 2018. Ecnomus of Madagascar, species without modified spur (Trichoptera: Ecnomidae). Annales de la Société entomologique de France (N.S.) 54(1): 51-66 (doi:10.1080/00379271.2017.1411210)
  42. Gibon F.-M. 2018. The Chimarra of the georgensis and fallax species groups in Madagascar (Trichoptera, Philopotamidae). Oriental Insects 52(2): 113-127 (doi:10.1080/00305316.2017.1379448)
  43. Guignot F, Fortini D, Grateau S, Burette C, Dreyfus V, Moreau-Vauzelle C, Aupinel P, Blesbois E. 2018 Early steps of cryopreservation of day one honeybee (Apis mellifera) embryos treated with low-frequency sonophoresis. Cryobiology. 83:27-33
  44. Haran J. 2018. A review of the genus Smicronyx Schoenherr (Coleoptera, Curculionidae, Curculioninae) in tropical Africa. Zootaxa 4508(2): 267-287 (doi:10.11646/zootaxa.4508.2.9)
  45. Haran J., Delvare G., Vayssières J.-F., Benoit L., Cruaud P., Rasplus J.-Y. & Cruaud A. 2018. Increasing the utility of barcode databases through high-throughput sequencing of amplicons from dried museum specimens, an example on parasitic hymenoptera (Braconidae). Biological Control 122: 93-100 (doi:10.1016/j.biocontrol.2018.04.001)
  46. Herrmann, Doris, Sandrine Flajoulot, Philippe Barre, Christian Huyghe, Joëlle Ronfort, et Bernadette Julier. 2018. « Comparison of Morphological Traits and Molecular Markers to Analyse Diversity and Structure of Alfalfa (Medicago Sativa L.) Cultivars ». Genetic Resources and Crop Evolution 65 (2): 527‑40. https://doi.org/10.1007/s10722-017-0551-z.
  47. Hibrand Saint-Oyant, L., T. Ruttink, L. Hamama, I. Kirov, D. Lakwani, N.-N. Zhou, P.M. Bourke, et al. 2018. « A High-Quality Sequence of Rosa Chinensis to Elucidate Genome Structure and Ornamental Traits ». Preprint. Genomics. https://doi.org/10.1101/254102.
  48. Into P, Pontes A, Jacques N, Casaregola S, Limtong S, Sampaio JP. Papiliotrema plantarum sp. nov., a novel tremellaceous sexual yeast species. Int J Syst Evol Microbiol. (2018). 68(6):1937-1941. DOI: 10.1099/ijsem.0.002771.
  49. Janšta P., Cruaud A., Delvare G., Genson G., Heraty J., Křížková B. & Rasplus J.-Y. 2018. Torymidae (Hymenoptera, Chalcidoidea) revised: molecular phylogeny, circumscription and reclassification of the family with discussion of its biogeography and evolution of life-history traits. Cladistics 34(6): 627-651 (doi:10.1111/cla.12228)
  50. Jarry, M., Beall, E., Davaine, P., Gueraud, F., Gaudin, P., Aymes, J.-C., Labonne, J., Vignon, M. (2018). Sea trout (Salmo trutta) growth patterns during early steps of invasion in the Kerguelen Islands. Polar Biology, 41 (5), 925-934. , DOI : 10.1007/s00300-018-2253-1 [N = 0; IF = 1.949]
  51. Jinagool, Wanploy, Lia Lamacque, Marine Delmas, Sylvain Delzon, Herve Cochard, et Stephane Herbette. 2018. « Is There Variability for Xylem Vulnerability to Cavitation in Walnut Tree Cultivars and Species (Juglans spp.)? » HORTSCIENCE 53 (2): 132‑37. https://doi.org/10.21273/HORTSCI12350-17.
  52. Joet, Thierry, et Stephane Dussert. 2018. « Environmental and genetic effects on coffee seed biochemical composition and quality ». In ACHIEVING SUSTAINABLE CULTIVATION OF COFFEE: BREEDING AND QUALITY TRAITS, édité par Lashermes, P, 39:49‑67. Burleigh Dodds Series in Agricultural Science. https://doi.org/10.19103/AS.2017.0022.03.
  53. Julier, Bernadette, Philippe Barre, Paola Lambroni, Sabrina Delaunay, Muriel Thomasset, Frédéric Lafaillette, et Vincent Gensollen. 2018. « Use of GBS Markers to Distinguish among Lucerne Varieties, with Comparison to Morphological Traits ». Molecular Breeding 38 (11): 133. https://doi.org/10.1007/s11032-018-0891-1.
  54. Kontschán J., Lorne M. & Kreiter S. 2018. First record of Penthalodes ovalis (Dugès, 1834) in agricultural area with notes on its pest status (Acari: Penthalodidae). Acta Phytopathologica et Entomologica Hungarica 53(2): 253-257 (doi:10.1556/038.53.2018.017)
  55. Kreiter S., Fontaine O., Payet R.-M. &. 2018. New records of Phytoseiidae (Acari: Mesostigmata) from Mauritius. Acarologia 58(4): 773-785 (doi:10.24349/acarologia/20184273)
  56. Kreiter S., Payet R.-M., Fillâtre J. & Abdou Azali H. 2018. First records of Phytoseiidae (Acari: Mesostigmata) from one island of the Comoros Archipelago. Acarologia 58(3): 529-545 (doi:10.24349/acarologia/20184256)
  57. Kreiter S., Zriki G., Ryckewaert P., Pancarte C., Douin M. & Tixier M.-S. 2018. Phytoseiid mites of Martinique, with redescription of four species and new records (Acari: Mesostigmata). Acarologia 58(2): 366-407 (doi:10.24349/acarologia/20184248)
  58. L Garnier, J Mounier, S Lê, A Pawtowski, N Pinon, B Camier, M Chatel, G Garric, A Thierry, E Coton and F Valence. Development of antifungal ingredients for dairy products: from in vitro screening to pilot scale application. Food microbiology (2018). https://doi.org/10.1016/j.fm.2018.11.003
  59. L Garnier, ML Salas; N Pinon; N Wiernasz; A Pawtowski; E Coton; J Mounier; F Valence. Technical note: High-throughput method for antifungal activity screening in a cheese-mimicking model. Journal of Dairy Science 101, 4971–4976 (2018) DOI: 10.3168/jds.2017-13518
  60. Labbe, C., Haffray, P., Mingant, C., Quittet, B., Diss, B., Tervit, H.R., Adams, S.L., Rimond, F., Suquet, M.,. 2018 Cryopreservation of Pacific oyster (Crassostrea gigas) larvae: Revisiting the practical limitations and scaling up the procedure for application to hatchery. Aquaculture 488, 227-234.
  61. Lachance MA, Vale HMM, Sperandio EM, Carvalho AOS, Santos ARO, Grondin C, Jacques N, Casaregola S, Rosa CA. Wickerhamiella dianeseif.a., sp. nov. and Wickerhamiella kurtzmanii f.a., sp. nov., two yeast species isolated from plants and insects. Int J Syst Evol Microbiol. (2018). 68(10):3351-3355. DOI: 10.1099/ijsem.0.003000.
  62. Laucou, Valerie, Amandine Launay, Roberto Bacilieri, Thierry Lacombe, Anne-Francoise Adam-Blondon, Aurelie Berard, Aurelie Chauveau, et al. 2018. « Extended diversity analysis of cultivated grapevine Vitis vinifera with 10K genome-wide SNPs ». PLOS ONE 13 (2). https://doi.org/10.1371/journal.pone.0192540.
  63. Le Béguec C, Wucher V, Lagoutte L, Cadieu E, Botherel N, Hédan B, De Brito C, Guillory AS, André C, Derrien T, Hitte C.. 2018 Characterisation and functional predictions of canine long non-coding RNAs. Sci Rep. 2018 Sep 7
  64. Lechaudel, Mathieu, Marie Darnaudery, Thierry Joet, Patrick Fournier, et Jacques Joas. 2018. « Genotypic and environmental effects on the level of ascorbic acid, phenolic compounds and related gene expression during pineapple fruit development and ripening ». PLANT PHYSIOLOGY AND BIOCHEMISTRY 130 (septembre): 127‑38. https://doi.org/10.1016/j.plaphy.2018.06.041.
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Rédaction : RARe - Edition P. Huan
Date de création : 22 Mars 2021
Mise à jour : 24 Janvier 2022

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